SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    2280, 2327, 2328, 2329, 2330, 2394, 2395, 
    2396, 2397, 2398, 2399, 2400, 2401, 
    2402, 2505, 2506, 2507, 2508, 5876, 
    5877, 5878, 5879, 5880, 5926
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00064

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "17.26"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 25,
        "rows_produced_per_join": 4,
        "filtered": "20.00",
        "index_condition": "(`gaseus`.`cscart_product_prices`.`product_id` in (2280,2327,2328,2329,2330,2394,2395,2396,2397,2398,2399,2400,2401,2402,2505,2506,2507,2508,5876,5877,5878,5879,5880,5926))",
        "cost_info": {
          "read_cost": "16.76",
          "eval_cost": "0.50",
          "prefix_cost": "17.26",
          "data_read_per_join": "119"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`gaseus`.`cscart_product_prices`.`lower_limit` = 1) and (`gaseus`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
2280 0.00000000
2327 0.00000000
2328 0.00000000
2329 0.00000000
2330 0.00000000
2394 0.00000000
2395 0.00000000
2396 0.00000000
2397 0.00000000
2398 0.00000000
2399 0.00000000
2400 0.00000000
2401 0.00000000
2402 0.00000000
2505 0.00000000
2506 0.00000000
2507 0.00000000
2508 0.00000000
5876 0.00000000
5877 0.00000000
5878 0.00000000
5879 0.00000000
5880 0.00000000
5926 0.00000000