SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    231, 232, 264, 265, 266, 267, 268, 269, 
    270, 318, 319, 320, 321, 322, 323, 3961, 
    3962, 3963, 3964, 3965, 3966, 3967, 
    4006, 4007
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00061

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "16.81"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 24,
        "rows_produced_per_join": 4,
        "filtered": "20.00",
        "index_condition": "(`gaseus`.`cscart_product_prices`.`product_id` in (231,232,264,265,266,267,268,269,270,318,319,320,321,322,323,3961,3962,3963,3964,3965,3966,3967,4006,4007))",
        "cost_info": {
          "read_cost": "16.33",
          "eval_cost": "0.48",
          "prefix_cost": "16.81",
          "data_read_per_join": "115"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`gaseus`.`cscart_product_prices`.`lower_limit` = 1) and (`gaseus`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
231 0.00000000
232 0.00000000
264 0.00000000
265 0.00000000
266 0.00000000
267 0.00000000
268 0.00000000
269 0.00000000
270 0.00000000
318 0.00000000
319 0.00000000
320 0.00000000
321 0.00000000
322 0.00000000
323 0.00000000
3961 0.00000000
3962 0.00000000
3963 0.00000000
3964 0.00000000
3965 0.00000000
3966 0.00000000
3967 0.00000000
4006 0.00000000
4007 0.00000000