SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    2271, 2336, 2337, 2338, 2339, 2412, 2413, 
    2414, 2415, 2416, 2417, 2418, 2419, 
    2420, 2514, 2515, 2516, 2517, 2518, 
    2604, 2605, 2606, 2607, 3840
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00095

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "16.81"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 24,
        "rows_produced_per_join": 4,
        "filtered": "20.00",
        "index_condition": "(`gaseus`.`cscart_product_prices`.`product_id` in (2271,2336,2337,2338,2339,2412,2413,2414,2415,2416,2417,2418,2419,2420,2514,2515,2516,2517,2518,2604,2605,2606,2607,3840))",
        "cost_info": {
          "read_cost": "16.33",
          "eval_cost": "0.48",
          "prefix_cost": "16.81",
          "data_read_per_join": "115"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`gaseus`.`cscart_product_prices`.`lower_limit` = 1) and (`gaseus`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
2271 0.00000000
2336 0.00000000
2337 0.00000000
2338 0.00000000
2339 0.00000000
2412 0.00000000
2413 0.00000000
2414 0.00000000
2415 0.00000000
2416 0.00000000
2417 0.00000000
2418 0.00000000
2419 0.00000000
2420 0.00000000
2514 0.00000000
2515 0.00000000
2516 0.00000000
2517 0.00000000
2518 0.00000000
2604 0.00000000
2605 0.00000000
2606 0.00000000
2607 0.00000000
3840 0.00000000