SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    1955, 1956, 1957, 1958, 1959, 1960, 1961, 
    1962, 1963, 1964, 1965, 1966, 1967, 
    1968, 1969, 1970, 1971, 1972, 1973, 
    1974, 1975, 1976, 1977, 1978, 1979, 
    1980, 1981, 1982, 1983, 1984, 4253, 
    4254, 4255, 4256, 4257, 4258, 4259, 
    4260, 4261, 5614, 5615, 5616, 5617, 
    5618, 5619, 5620, 5621, 5622, 5623, 
    5624, 5625, 5626, 5627, 5628, 5629, 
    5630, 5631, 5632, 5633, 5634, 5635, 
    5636, 5637, 5638, 5639, 5640, 5641, 
    5642, 5643, 5644, 5645, 5646, 5647, 
    5648, 5649, 5650, 5651, 5652, 5653, 
    5654, 5655, 5656, 5657, 5658, 5659, 
    5660, 5661, 5662, 5663, 5664, 5665, 
    5666, 5667, 3137, 1473, 1474
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00232

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "67.66"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 97,
        "rows_produced_per_join": 19,
        "filtered": "20.00",
        "index_condition": "(`gaseus`.`cscart_product_prices`.`product_id` in (1955,1956,1957,1958,1959,1960,1961,1962,1963,1964,1965,1966,1967,1968,1969,1970,1971,1972,1973,1974,1975,1976,1977,1978,1979,1980,1981,1982,1983,1984,4253,4254,4255,4256,4257,4258,4259,4260,4261,5614,5615,5616,5617,5618,5619,5620,5621,5622,5623,5624,5625,5626,5627,5628,5629,5630,5631,5632,5633,5634,5635,5636,5637,5638,5639,5640,5641,5642,5643,5644,5645,5646,5647,5648,5649,5650,5651,5652,5653,5654,5655,5656,5657,5658,5659,5660,5661,5662,5663,5664,5665,5666,5667,3137,1473,1474))",
        "cost_info": {
          "read_cost": "65.72",
          "eval_cost": "1.94",
          "prefix_cost": "67.66",
          "data_read_per_join": "465"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`gaseus`.`cscart_product_prices`.`lower_limit` = 1) and (`gaseus`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
1473 0.00000000
1474 0.00000000
1955 0.00000000
1956 0.00000000
1957 0.00000000
1958 0.00000000
1959 0.00000000
1960 0.00000000
1961 0.00000000
1962 0.00000000
1963 0.00000000
1964 0.00000000
1965 0.00000000
1966 0.00000000
1967 0.00000000
1968 0.00000000
1969 0.00000000
1970 0.00000000
1971 0.00000000
1972 0.00000000
1973 0.00000000
1974 0.00000000
1975 0.00000000
1976 0.00000000
1977 0.00000000
1978 0.00000000
1979 0.00000000
1980 0.00000000
1981 0.00000000
1982 0.00000000
1983 0.00000000
1984 0.00000000
3137 608.00000000
4253 0.00000000
4254 0.00000000
4255 0.00000000
4256 0.00000000
4257 0.00000000
4258 0.00000000
4259 0.00000000
4260 0.00000000
4261 0.00000000
5614 0.00000000
5615 0.00000000
5616 0.00000000
5617 0.00000000
5618 0.00000000
5619 0.00000000
5620 0.00000000
5621 0.00000000
5622 0.00000000
5623 0.00000000
5624 0.00000000
5625 0.00000000
5626 0.00000000
5627 0.00000000
5628 0.00000000
5629 0.00000000
5630 0.00000000
5631 0.00000000
5632 0.00000000
5633 0.00000000
5634 0.00000000
5635 0.00000000
5636 0.00000000
5637 0.00000000
5638 0.00000000
5639 0.00000000
5640 0.00000000
5641 0.00000000
5642 0.00000000
5643 0.00000000
5644 0.00000000
5645 0.00000000
5646 0.00000000
5647 0.00000000
5648 0.00000000
5649 0.00000000
5650 0.00000000
5651 0.00000000
5652 0.00000000
5653 0.00000000
5654 0.00000000
5655 0.00000000
5656 0.00000000
5657 0.00000000
5658 0.00000000
5659 0.00000000
5660 0.00000000
5661 0.00000000
5662 0.00000000
5663 0.00000000
5664 0.00000000
5665 0.00000000
5666 0.00000000
5667 0.00000000