SELECT 
  cscart_products_categories.product_id, 
  GROUP_CONCAT(
    IF(
      cscart_products_categories.link_type = "M", 
      CONCAT(
        cscart_products_categories.category_id, 
        "M"
      ), 
      cscart_products_categories.category_id
    )
  ) AS category_ids, 
  product_position_source.position AS position 
FROM 
  cscart_products_categories 
  INNER JOIN cscart_categories ON cscart_categories.category_id = cscart_products_categories.category_id 
  AND cscart_categories.storefront_id IN (0, 1) 
  AND (
    cscart_categories.usergroup_ids = '' 
    OR FIND_IN_SET(
      0, cscart_categories.usergroup_ids
    ) 
    OR FIND_IN_SET(
      1, cscart_categories.usergroup_ids
    )
  ) 
  AND cscart_categories.status IN ('A', 'H') 
  LEFT JOIN cscart_products_categories AS product_position_source ON cscart_products_categories.product_id = product_position_source.product_id 
  AND product_position_source.category_id = 308 
WHERE 
  cscart_products_categories.product_id IN (
    5400, 5401, 5402, 5403, 5404, 5405, 5406, 
    5407, 5408, 5409, 5410, 5411, 5412, 
    5413, 5414, 6728, 515, 3156, 3676, 5131, 
    1654, 1655, 1656, 1657, 1658, 1659, 
    1660, 1661, 1662, 1663, 1664, 1665, 
    1666, 1667, 1668, 1669, 1670, 1671, 
    2220, 2221, 2222, 2223, 5353, 5354, 
    5355, 5356, 5357, 5358
  ) 
GROUP BY 
  cscart_products_categories.product_id

Query time 0.00123

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "69.05"
    },
    "grouping_operation": {
      "using_temporary_table": true,
      "using_filesort": true,
      "cost_info": {
        "sort_cost": "7.84"
      },
      "nested_loop": [
        {
          "table": {
            "table_name": "cscart_categories",
            "access_type": "ALL",
            "possible_keys": [
              "PRIMARY",
              "c_status",
              "p_category_id"
            ],
            "rows_examined_per_scan": 40,
            "rows_produced_per_join": 1,
            "filtered": "4.00",
            "cost_info": {
              "read_cost": "4.54",
              "eval_cost": "0.16",
              "prefix_cost": "4.70",
              "data_read_per_join": "6K"
            },
            "used_columns": [
              "category_id",
              "storefront_id",
              "usergroup_ids",
              "status"
            ],
            "attached_condition": "((`gaseus`.`cscart_categories`.`storefront_id` in (0,1)) and ((`gaseus`.`cscart_categories`.`usergroup_ids` = '') or (0 <> find_in_set(0,`gaseus`.`cscart_categories`.`usergroup_ids`)) or (0 <> find_in_set(1,`gaseus`.`cscart_categories`.`usergroup_ids`))) and (`gaseus`.`cscart_categories`.`status` in ('A','H')))"
          }
        },
        {
          "table": {
            "table_name": "cscart_products_categories",
            "access_type": "range",
            "possible_keys": [
              "PRIMARY",
              "pt"
            ],
            "key": "pt",
            "used_key_parts": [
              "product_id"
            ],
            "key_length": "3",
            "rows_examined_per_scan": 49,
            "rows_produced_per_join": 7,
            "filtered": "10.00",
            "index_condition": "(`gaseus`.`cscart_products_categories`.`product_id` in (5400,5401,5402,5403,5404,5405,5406,5407,5408,5409,5410,5411,5412,5413,5414,6728,515,3156,3676,5131,1654,1655,1656,1657,1658,1659,1660,1661,1662,1663,1664,1665,1666,1667,1668,1669,1670,1671,2220,2221,2222,2223,5353,5354,5355,5356,5357,5358))",
            "using_join_buffer": "hash join",
            "cost_info": {
              "read_cost": "46.66",
              "eval_cost": "0.78",
              "prefix_cost": "59.20",
              "data_read_per_join": "125"
            },
            "used_columns": [
              "product_id",
              "category_id",
              "link_type"
            ],
            "attached_condition": "(`gaseus`.`cscart_products_categories`.`category_id` = `gaseus`.`cscart_categories`.`category_id`)"
          }
        },
        {
          "table": {
            "table_name": "product_position_source",
            "access_type": "eq_ref",
            "possible_keys": [
              "PRIMARY",
              "pt"
            ],
            "key": "PRIMARY",
            "used_key_parts": [
              "category_id",
              "product_id"
            ],
            "key_length": "6",
            "ref": [
              "const",
              "gaseus.cscart_products_categories.product_id"
            ],
            "rows_examined_per_scan": 1,
            "rows_produced_per_join": 7,
            "filtered": "100.00",
            "cost_info": {
              "read_cost": "1.23",
              "eval_cost": "0.78",
              "prefix_cost": "61.21",
              "data_read_per_join": "125"
            },
            "used_columns": [
              "product_id",
              "category_id",
              "position"
            ]
          }
        }
      ]
    }
  }
}

Result

product_id category_ids position
515 308M 0
1654 308M 0
1655 308M 0
1656 308M 0
1657 308M 0
1658 308M 0
1659 308M 0
1660 308M 0
1661 308M 0
1662 308M 0
1663 308M 0
1664 308M 0
1665 308M 0
1666 308M 0
1667 308M 0
1668 308M 0
1669 308M 0
1670 308M 0
1671 308M 0
2220 308M 0
2221 308M 0
2222 308M 0
2223 308M 0
3156 308M 0
3676 308M 0
5131 308M 0
5353 308M 0
5354 308M 0
5355 308M 0
5356 308M 0
5357 308M 0
5358 308M 0
5400 308M 0
5401 308M 0
5402 308M 0
5403 308M 0
5404 308M 0
5405 308M 0
5406 308M 0
5407 308M 0
5408 308M 0
5409 308M 0
5410 308M 0
5411 308M 0
5412 308M 0
5413 308M 0
5414 308M 0
6728 308M 0