SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    2772, 2773, 2774, 2775, 2776, 2777, 2845, 
    2846, 2847, 2848, 2849, 2850, 2851, 
    2852, 2853, 2854, 2855, 2856, 2857, 
    2858, 2859, 2860, 2861, 2862, 2942, 
    2943, 2944, 2945, 2946, 2947, 2948, 
    2949, 2950, 3037, 3038, 3039, 3040, 
    3041, 3042, 3043, 3044, 3045, 3853, 
    5790, 5791, 5792, 5793, 5794, 5795, 
    5796, 5797, 5798, 6307, 6308, 6309, 
    6310, 6311, 6357, 6358, 6359, 6360, 
    6361, 6362, 6363, 6364, 6365, 6431, 
    6432, 6433, 6434, 6435, 6436, 6437, 
    6438, 6439, 6440, 6441, 6442, 6443, 
    6444, 6445, 6446, 6447, 6526, 6527, 
    6528, 6529, 6530, 6531, 6532, 6533, 
    6534, 6615, 6616, 6617, 6618
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00123

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "67.66"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 97,
        "rows_produced_per_join": 19,
        "filtered": "20.00",
        "index_condition": "(`gaseus`.`cscart_product_prices`.`product_id` in (2772,2773,2774,2775,2776,2777,2845,2846,2847,2848,2849,2850,2851,2852,2853,2854,2855,2856,2857,2858,2859,2860,2861,2862,2942,2943,2944,2945,2946,2947,2948,2949,2950,3037,3038,3039,3040,3041,3042,3043,3044,3045,3853,5790,5791,5792,5793,5794,5795,5796,5797,5798,6307,6308,6309,6310,6311,6357,6358,6359,6360,6361,6362,6363,6364,6365,6431,6432,6433,6434,6435,6436,6437,6438,6439,6440,6441,6442,6443,6444,6445,6446,6447,6526,6527,6528,6529,6530,6531,6532,6533,6534,6615,6616,6617,6618))",
        "cost_info": {
          "read_cost": "65.72",
          "eval_cost": "1.94",
          "prefix_cost": "67.66",
          "data_read_per_join": "465"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`gaseus`.`cscart_product_prices`.`lower_limit` = 1) and (`gaseus`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
2772 0.00000000
2773 0.00000000
2774 0.00000000
2775 0.00000000
2776 0.00000000
2777 0.00000000
2845 0.00000000
2846 0.00000000
2847 0.00000000
2848 0.00000000
2849 0.00000000
2850 0.00000000
2851 0.00000000
2852 0.00000000
2853 0.00000000
2854 0.00000000
2855 0.00000000
2856 0.00000000
2857 0.00000000
2858 0.00000000
2859 0.00000000
2860 0.00000000
2861 0.00000000
2862 0.00000000
2942 0.00000000
2943 0.00000000
2944 0.00000000
2945 0.00000000
2946 0.00000000
2947 0.00000000
2948 0.00000000
2949 0.00000000
2950 0.00000000
3037 0.00000000
3038 0.00000000
3039 0.00000000
3040 0.00000000
3041 0.00000000
3042 0.00000000
3043 0.00000000
3044 0.00000000
3045 0.00000000
3853 0.00000000
5790 0.00000000
5791 0.00000000
5792 0.00000000
5793 0.00000000
5794 0.00000000
5795 0.00000000
5796 0.00000000
5797 0.00000000
5798 0.00000000
6307 0.00000000
6308 0.00000000
6309 0.00000000
6310 0.00000000
6311 0.00000000
6357 0.00000000
6358 0.00000000
6359 0.00000000
6360 0.00000000
6361 0.00000000
6362 0.00000000
6363 0.00000000
6364 0.00000000
6365 0.00000000
6431 0.00000000
6432 0.00000000
6433 0.00000000
6434 0.00000000
6435 0.00000000
6436 0.00000000
6437 0.00000000
6438 0.00000000
6439 0.00000000
6440 0.00000000
6441 0.00000000
6442 0.00000000
6443 0.00000000
6444 0.00000000
6445 0.00000000
6446 0.00000000
6447 0.00000000
6526 0.00000000
6527 0.00000000
6528 0.00000000
6529 0.00000000
6530 0.00000000
6531 0.00000000
6532 0.00000000
6533 0.00000000
6534 0.00000000
6615 0.00000000
6616 0.00000000
6617 0.00000000
6618 0.00000000