SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    6447, 6526, 6527, 6528, 6529, 6530, 6531, 
    6532, 6533, 6534, 6615, 6616, 6617, 
    6618, 6619, 6620, 6621, 6622, 2272, 
    2273, 2274, 2275, 2276, 2340
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00076

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "16.81"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 24,
        "rows_produced_per_join": 4,
        "filtered": "20.00",
        "index_condition": "(`gaseus`.`cscart_product_prices`.`product_id` in (6447,6526,6527,6528,6529,6530,6531,6532,6533,6534,6615,6616,6617,6618,6619,6620,6621,6622,2272,2273,2274,2275,2276,2340))",
        "cost_info": {
          "read_cost": "16.33",
          "eval_cost": "0.48",
          "prefix_cost": "16.81",
          "data_read_per_join": "115"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`gaseus`.`cscart_product_prices`.`lower_limit` = 1) and (`gaseus`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
2272 0.00000000
2273 0.00000000
2274 0.00000000
2275 0.00000000
2276 0.00000000
2340 0.00000000
6447 0.00000000
6526 0.00000000
6527 0.00000000
6528 0.00000000
6529 0.00000000
6530 0.00000000
6531 0.00000000
6532 0.00000000
6533 0.00000000
6534 0.00000000
6615 0.00000000
6616 0.00000000
6617 0.00000000
6618 0.00000000
6619 0.00000000
6620 0.00000000
6621 0.00000000
6622 0.00000000