SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    6013, 6014, 6015, 6016, 6017, 6018, 6019, 
    6020, 6196, 6197, 6198, 6199, 6200, 
    6732, 2836, 2837, 2838, 2839, 2840, 
    6422, 6423, 6424, 6425, 2937
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00096

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "16.81"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 24,
        "rows_produced_per_join": 4,
        "filtered": "20.00",
        "index_condition": "(`gaseus`.`cscart_product_prices`.`product_id` in (6013,6014,6015,6016,6017,6018,6019,6020,6196,6197,6198,6199,6200,6732,2836,2837,2838,2839,2840,6422,6423,6424,6425,2937))",
        "cost_info": {
          "read_cost": "16.33",
          "eval_cost": "0.48",
          "prefix_cost": "16.81",
          "data_read_per_join": "115"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`gaseus`.`cscart_product_prices`.`lower_limit` = 1) and (`gaseus`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
2836 0.00000000
2837 0.00000000
2838 0.00000000
2839 0.00000000
2840 0.00000000
2937 0.00000000
6013 0.00000000
6014 0.00000000
6015 0.00000000
6016 0.00000000
6017 0.00000000
6018 0.00000000
6019 0.00000000
6020 0.00000000
6196 0.00000000
6197 0.00000000
6198 0.00000000
6199 0.00000000
6200 0.00000000
6422 0.00000000
6423 0.00000000
6424 0.00000000
6425 0.00000000
6732 428.00000000